If you tape everything that is ok and just leave the places with pinholes, use a sponge with some epoxy resin, go over the pinholesI if the surface is flat, go over it with a hairdryer to level it all out,  and let it cure. 

Im working with out of autoclave prepreg, pinholes are evenly spread throughout the part and also they are very, very small. Microscopic even, some dont appear until you apply the clear coat, as they seem to get bigger the more coats it gets.

It needs to be quick and easy, as I can't spend half the day on a part thats half a square metre. Time is money and all that.